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The human brain remains one of the most complex systems studied in science. Despite remarkable advances in neuroscience, psychology, and physiology, fundamental questions about how neural activity gives rise to perception, memory, emotion, and decision-making remain open. We have mapped circuits, identified activity patterns associated with specific behaviors, and developed powerful computational models. Yet translating these mechanistic insights into a fully integrated understanding of cognition is still an ongoing challenge.

 

Modern tools allow us to observe neuronal activity in real time, link molecular pathways to behavioral outcomes, and experimentally manipulate defined circuits. At the same time, research on unicellular organisms reminds us that information processing does not begin with brains. Even single cells sense their environment, integrate signals, and adapt their behavior accordingly. These processes are executed through dynamic molecular networks—proteins, RNAs, and cytoskeletal structures—that encode, transmit, and regulate information at a fundamental level.

Studying how information is organized and processed within simple biological systems may therefore illuminate principles that scale to neural networks and complex behavior. Rather than invoking speculative frameworks, this approach focuses on measurable mechanisms: how interacting RNAs, protein assemblies, and cellular architecture shape signaling, plasticity, and adaptive responses.

The task ahead is to develop conceptual and experimental tools that bridge molecular dynamics and systems-level function. By grounding big questions in rigorous cellular and biophysical investigation, we can progressively close the gap between neural mechanisms and behavior.

Aromatic networks in protein architecture and their role in biological information processing and behavior

The nexus of quantum biology, cellular signaling, and neuroscience has raised compelling questions about the role of quantum processing in biological information processing and its implications in cognition and behavior.

Recent studies suggest that quantum coherence and superradiance may underlie efficient signaling in diverse protein architectures - not just in the nervous system but across biological systems more broadly (Babcock 2024, Patwa 2024). This raises important questions about how quantum effects might influence functional biological processes. Protein structures such as microtubules, actomyosin networks, and other cytoskeletal components have been investigated for their potential quantum roles.

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Microtubules are found in all eukaryotic cells and are well-known for their involvement in structural integrity, intracellular transport, and signal transduction. They have also been implicated in cognitive functions such as learning and memory in animal models (Uchida 2014, Dent 2017, Hosseini 2022), and their disruption is associated with neurodegenerative disorders like Alzheimer's disease (Fernandez 2020).

More broadly, Kurian and colleagues have proposed that organized aromatic amino acids like tryptophan networks, ubiquitous across many protein structures, can facilitate ultraviolet (UV) superradiance and coherent excitonic states, potentially enabling quantum information transfer in living systems (Babcock 2024, Patwa 2024). This mechanism may allow for the absorption, transfer, and emission of photons in a coordinated manner, enhancing the fidelity and efficiency of intracellular signaling. While these findings offer an intriguing link between quantum physics and biological function the biological significance of such effects remains to be fully demonstrated. 

Tryptophan networks in microtubules (Patwa 2024)

Single-celled eukaryotic organisms like Tetrahymena thermophila are uniquely suited to probe the interface between quantum biology and behavior. Despite lacking a nervous system, these organisms exhibit surprisingly complex behaviors such as decision-making, learning, and memory (Brette 2021). Their cyotskeletal systems, particularly microtubules, have been implicated in regulating electrophysiological responses and intracellular communication. We thus hypothesize that organized tryptophan networks in Tetrahymena's microtubules may support coherent superradiant states that play a role in quantum information processing and behavioral decision-making.

RNA molecules interacting with protein architecture - the quantum genome

Epigenetics studies how gene expression can be modified without altering the underlying DNA sequence. Analogously, dynamic interactions between RNA and protein networks, such as microtubules and microtubule-associated proteins (MAPs) forming phase-separated condensates (Hernandez-Vega et al., 2017), have the potential to modulate cellular information processing and influence behavior at the cellular level. My PhD research on noncoding RNAs, combined with work on RNA–protein interactions regulating genes through phase separation (Oszuk et al., 2023; Overholt and Vancura et al., 2025, under review), provides a strong foundation to explore these processes. This research sits at the intersection of neuroscience, RNA biology, and biophysics, offering a mechanistic framework to better understand how complex molecular networks contribute to neuronal function and cognition.

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